Journal: Nature structural & molecular biology
Article Title: ADAR1 controls apoptosis of stressed cells by inhibiting Staufen1-mediated mRNA decay.
doi: 10.1038/nsmb.3403
Figure Lengend Snippet: Figure 3 Phosphorylation of ADAR1p110 at five sites. (a) Phos-tag PAGE and western blotting to detect phosphorylated ADAR1p110. A172 cell extracts were prepared after UV irradiation, transient transfection with the MKK6* expression construct in the absence or presence of the p38 inhibitor SB203580, or simultaneous knockdown of MSK1 and MSK2. λPPase indicates treatment with λ-phosphatase before SDS–PAGE. β-Actin, loading control. (b) Phos-tag SDS–PAGE analysis of FLAG-ADAR1p110 recombinant proteins. Cell extracts were prepared from A172 cells transiently transfected with the FLAG-ADAR1p110 expression construct with or without UV irradiation. Uncropped images of a and b are shown in Supplementary Data Set 2. (c) Phosphorylation sites identified by LC-MS/MS are shown. The dsRBD3 region (T725–P809) is highlighted in yellow. Identified phosphorylation sites are in red. Bottom, numbered dashed lines indicate peptides identified by LC-MS/MS. (d) Model of human ADAR1 dsRBD3 and the downstream region in complex with dsRNA. The region of ADAR1 spanning residues 715–799 belongs to the standard dsRBD, whereas the region downstream of this domain, where T808, T811, S814, S823, S825 are located, is disordered. The lysines K777, K778, and K781 coordinating the dsRNA are indicated. (e) Localization of ADAR1p110 phosphorylation-inhibitory (T/S-to-A) and phosphorylation-mimetic (T/S-to-D) mutants. Scale bar, 20 µm.
Article Snippet: For p38 MAPK inhibition, the treatment of the cell culture with 10 μM of SB203580 (Selleckchem) started before UV irradiation and continued until recovery of cells.
Techniques: Phospho-proteomics, Western Blot, Irradiation, Transfection, Expressing, Construct, Knockdown, SDS Page, Control, Recombinant, Liquid Chromatography with Mass Spectroscopy